Python Settings

The following pages contain all settings that are possible to specify for the different objects. This is the user documentation that provides information outside of the C++ code.

Contents:

• Mesh
  • C++ class template Mesh
  • Python settings for Mesh
• MappingsBetweenMeshes
  • Python Settings
  • Mapping
• Solver
  • solverType
  • preconditionerType
  • relativeTolerance
  • maxIterations
  • Command line options for PETSc
  • dumpFilename
  • dumpFormat
• Boundary Conditions
  • Python settings
  • Dirichlet Boundary Conditions
  • Dirichlet Output Filename
  • Neumann Boundary Conditions
• Connector Slots
  • connectedSlotsTerm1To2 and connectedSlotsTerm2To1
  • solverStructureDiagramFile
  • Using global slot names
  • Connection by choosing equal slot names
  • Example
• FiniteElementMethod
  • Description
  • C++ instantiation
  • Python Settings
  • Properties
  • Location in the code
  • Examples
• TimeSteppingSchemesOde
  • Common properties
  • ExplicitEuler
  • ImplicitEuler
  • Heun
  • HeunAdaptive
  • CrankNicolson
• Operator Splitting
  • GodunovSplitting
  • StrangSplitting
• Coupling
• MultipleCoupling
• OutputWriter
  • filename
  • outputInterval
  • fileNumbering
  • Paraview
  • PythonFile
  • PythonCallback
  • ExFile
  • MegaMol
• OutputSurface
  • Output of surface meshes
  • Surface Sampling
• MultidomainSolver
  • C++ code
  • Python settings
• MultipleInstances
  • nInstances
  • instances
  • ranks
• FastMonodomainSolver
  • Usage
  • Python options
  • Tampering the generated source code
• CellMLAdapter
  • Usage
  • modelFilename
  • libraryFilename
  • statesInitialValues
  • initializeStatesToEquilibrium and initializeStatesToEquilibriumTimestepWidth
  • Callbacks
  • How to specify mappings of states, algebraics and parameters
  • parametersInitialValues
  • mappings
  • meshName
  • stimulationLogFilename
  • optimizationType
  • compilerFlags
• QuasiStaticLinearElasticitySolver
  • dirichletBoundaryConditions
  • Python Settings
• StaticBidomainSolver
  • C++ instantiation
  • slotNames
• Hyperelasticity
  • Description
  • C++ instantiation
  • Python settings
• Dynamic hyperelasticity
  • C++ instantiation
  • Python settings
• Muscle contraction solver
  • C++ instantiation
  • Python settings
• PrescribedValues
  • Usage
  • meshName
  • slotNames
  • additionalArgument
  • Callback Function
• Dummy
• MapDofs
  • C++ code
  • Python settings
  • nAdditionalFieldVariables
  • additionalSlotNames
  • meshName
  • beforeComputation and afterComputation
  • fromConnectorSlot and toConnectorSlots
  • fromOutputConnectorArrayIndex and toOutputConnectorArrayIndex
  • mode
  • “fromDofNosNumbering” and “toDofNosNumbering”
  • dofsMapping
  • inputDofs
  • outputDofs
  • callback
  • Exemplary solver structure
• PreciceAdapter
  • Surface coupling
  • Volume coupling